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Increase test timeout for Perl v5.42.0 tests - #279

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casparvl wants to merge 6 commits into
EESSI:mainfrom
casparvl:reduce_perl_test_parallelism
Open

Increase test timeout for Perl v5.42.0 tests#279
casparvl wants to merge 6 commits into
EESSI:mainfrom
casparvl:reduce_perl_test_parallelism

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@casparvl

@casparvl casparvl commented Aug 4, 2026

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@casparvl casparvl changed the title Reduce parallelism for Perl tests Reduce parallelism for Perl v5.42.0 tests Aug 4, 2026
@casparvl

casparvl commented Aug 4, 2026

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bot: build repo:eessi.io-2026.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2
bot: build repo:eessi.io-2026.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic
bot: build repo:eessi.io-2026.06-software instance:eessi-bot-deucalion for:arch=aarch64/a64fx
bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv for:arch=riscv64/generic

@eessi-bot-aws

eessi-bot-aws Bot commented Aug 4, 2026

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New job on instance eessi-bot-mc-aws for repository eessi.io-2026.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_279/183343

date job status comment
Aug 04 19:03:08 UTC 2026 submitted job id 183343 awaits release by job manager
Aug 04 19:03:36 UTC 2026 released job awaits launch by Slurm scheduler
Aug 04 19:05:11 UTC 2026 running job 183343 is running
Aug 04 19:36:50 UTC 2026 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-183343.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
❌ no message matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-x86_64-amd-zen2-17858720900.tar.zstsize: 0 MiB (31551 bytes)
entries: 1
modules under 2026.06/software/linux/x86_64/amd/zen2/modules/all
no module files in tarball
software under 2026.06/software/linux/x86_64/amd/zen2/software
no software packages in tarball
reprod directories under 2026.06/software/linux/x86_64/amd/zen2/reprod
no reprod directories in tarball
other under 2026.06/software/linux/x86_64/amd/zen2
no other files in tarball
Aug 04 19:36:50 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-183343.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@eessi-bot-deucalion

eessi-bot-deucalion Bot commented Aug 4, 2026

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New job on instance eessi-bot-deucalion for repository eessi.io-2026.06-software
Building on: a64fx
Building for: aarch64/a64fx
Job dir: /home/eessibot/new-bot/jobs/2026.08/pr_279/1804608

date job status comment
Aug 04 19:03:11 UTC 2026 submitted job id 1804608 awaits release by job manager
Aug 04 19:03:48 UTC 2026 released job awaits launch by Slurm scheduler
Aug 04 19:04:55 UTC 2026 running job 1804608 is running
Aug 04 20:06:18 UTC 2026 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-1804608.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
❌ no message matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-aarch64-a64fx-17858739140.tar.zstsize: 0 MiB (31561 bytes)
entries: 1
modules under 2026.06/software/linux/aarch64/a64fx/modules/all
no module files in tarball
software under 2026.06/software/linux/aarch64/a64fx/software
no software packages in tarball
reprod directories under 2026.06/software/linux/aarch64/a64fx/reprod
no reprod directories in tarball
other under 2026.06/software/linux/aarch64/a64fx
no other files in tarball
Aug 04 20:06:18 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-1804608.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@eessi-bot-aws

eessi-bot-aws Bot commented Aug 4, 2026

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New job on instance eessi-bot-mc-aws for repository eessi.io-2026.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_279/183344

date job status comment
Aug 04 19:03:13 UTC 2026 submitted job id 183344 awaits release by job manager
Aug 04 19:03:34 UTC 2026 released job awaits launch by Slurm scheduler
Aug 04 19:05:04 UTC 2026 running job 183344 is running
Aug 04 19:28:22 UTC 2026 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-183344.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-aarch64-generic-17858715730.tar.zstsize: 20 MiB (21475745 bytes)
entries: 3261
modules under 2026.06/software/linux/aarch64/generic/modules/all
Perl/5.42.0-GCCcore-15.2.0.lua
software under 2026.06/software/linux/aarch64/generic/software
Perl/5.42.0-GCCcore-15.2.0
reprod directories under 2026.06/software/linux/aarch64/generic/reprod
Perl/5.42.0-GCCcore-15.2.0/20260804_192608UTC
other under 2026.06/software/linux/aarch64/generic
no other files in tarball
Aug 04 19:28:22 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-183344.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@riscv-eessi-io-bot

riscv-eessi-io-bot Bot commented Aug 4, 2026

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New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.08/pr_279/319724

date job status comment
Aug 04 19:03:15 UTC 2026 submitted job id 319724 awaits release by job manager
Aug 04 19:03:51 UTC 2026 released job awaits launch by Slurm scheduler
Aug 04 19:04:55 UTC 2026 running job 319724 is running
Aug 04 20:39:36 UTC 2026 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-319724.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
❌ no message matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-riscv64-generic-17858757510.tar.zstsize: 0 MiB (31559 bytes)
entries: 1
modules under 2026.06/software/linux/riscv64/generic/modules/all
no module files in tarball
software under 2026.06/software/linux/riscv64/generic/software
no software packages in tarball
reprod directories under 2026.06/software/linux/riscv64/generic/reprod
no reprod directories in tarball
other under 2026.06/software/linux/riscv64/generic
no other files in tarball
Aug 04 20:39:36 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-319724.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@boegel

boegel commented Aug 5, 2026

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@casparvl Forcing to run the tests single-core oesn't seem to work consistently?

Maybe we need to set $PERL_TEST_TIME_OUT_FACTOR instead, it's perhaps not surprising that tests run rather slow (due to the unionfs overlay I/O isn't going to be fast)...

It's certainly relevant for dist/threads/t/libc.t, where $PERL_TEST_TIME_OUT_FACTOR is being picked up as a multiplier...

See also Perl/perl5@ec8902c

I would set it to 10 perhaps?

edit: if we still see test failures, then perhaps we've hitting a deadlock situation, that's exactly why a timeout was added to dist/threads/t/libc.t, see Perl/perl5@f976811

@casparvl

casparvl commented Aug 5, 2026

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bot: build repo:eessi.io-2026.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2

@eessi-bot-aws

eessi-bot-aws Bot commented Aug 5, 2026

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New job on instance eessi-bot-mc-aws for repository eessi.io-2026.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_279/183659

date job status comment
Aug 05 13:07:14 UTC 2026 submitted job id 183659 awaits release by job manager
Aug 05 13:08:17 UTC 2026 released job awaits launch by Slurm scheduler
Aug 05 13:15:20 UTC 2026 running job 183659 is running
Aug 05 13:44:10 UTC 2026 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-183659.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
❌ no message matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-x86_64-amd-zen2-17859374110.tar.zstsize: 0 MiB (31588 bytes)
entries: 1
modules under 2026.06/software/linux/x86_64/amd/zen2/modules/all
no module files in tarball
software under 2026.06/software/linux/x86_64/amd/zen2/software
no software packages in tarball
reprod directories under 2026.06/software/linux/x86_64/amd/zen2/reprod
no reprod directories in tarball
other under 2026.06/software/linux/x86_64/amd/zen2
no other files in tarball
Aug 05 13:44:10 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-183659.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

Comment thread eb_hooks.py Outdated
if self.name == "Perl" and self.version == "5.42.0":
self.cfg['pretestopts'] = "export PERL_TEST_TIME_OUT_FACTOR=10 && " + self.cfg['pretestopts']
if hasattr(self, 'parallel'):
self.cfg.parallel = 1

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@casparvl With $PERL_TEST_TIME_OUT_FACTOR, there should be no need anymore to enforce single-core?

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There isn't, I just didn't bother to take it out yet. But... it seems to not have helped anyway :(

@casparvl

casparvl commented Aug 5, 2026

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FYI: I wasn't able to reproduce this with EESSI-extend, but I was able to reproduce from running the bot/inspect.sh in the job dir using the build_step tarball to resume from. That means I can interactively test for solutions, which is much faster...

@boegel

boegel commented Aug 5, 2026

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@casparvl PERL_TEST_TIME_OUT_FACTOR is not being picked up in last test:

== 2026-08-05 13:23:59,547 run.py:532 INFO Running shell command in /tmp/bot/easybuild/build/Perl/5.42.0/GCCcore-15.2.0/perl-5.42.0:
        export LC_ALL=C && make test

Rather than using pretestopts, you can just set that environment variable with setvar instead...

Comment thread eb_hooks.py Outdated
Co-authored-by: Kenneth Hoste <kenneth.hoste@ugent.be>
@casparvl

casparvl commented Aug 5, 2026

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Ok, let's also try another build like this. Local testing is actually also slow, the test suite takes 20 minutes. And note that the tests run serially anyway. I'm not sure how disabling the parallelization ever helped @bedroge ... There is a compile step to the tests, that might be executed in parallel with make -j, but that wasn't where the issue was.

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2

@eessi-bot-aws

eessi-bot-aws Bot commented Aug 5, 2026

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New job on instance eessi-bot-mc-aws for repository eessi.io-2026.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_279/183660

date job status comment
Aug 05 14:16:21 UTC 2026 submitted job id 183660 awaits release by job manager
Aug 05 14:17:16 UTC 2026 released job awaits launch by Slurm scheduler
Aug 05 14:18:19 UTC 2026 running job 183660 is running
Aug 05 14:33:45 UTC 2026 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-183660.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-x86_64-amd-zen2-17859404040.tar.zstsize: 20 MiB (21671091 bytes)
entries: 3261
modules under 2026.06/software/linux/x86_64/amd/zen2/modules/all
Perl/5.42.0-GCCcore-15.2.0.lua
software under 2026.06/software/linux/x86_64/amd/zen2/software
Perl/5.42.0-GCCcore-15.2.0
reprod directories under 2026.06/software/linux/x86_64/amd/zen2/reprod
Perl/5.42.0-GCCcore-15.2.0/20260805_143316UTC
other under 2026.06/software/linux/x86_64/amd/zen2
no other files in tarball
Aug 05 14:33:45 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-183660.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@bedroge

bedroge commented Aug 5, 2026

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Ok, let's also try another build like this. Local testing is actually also slow, the test suite takes 20 minutes. And note that the tests run serially anyway. I'm not sure how disabling the parallelization ever helped @bedroge ... There is a compile step to the tests, that might be executed in parallel with make -j, but that wasn't where the issue was.

From what I remember it runs multiple tests in parallel, https://github.com/easybuilders/easybuild-easyblocks/blob/develop/easybuild/easyblocks/p/perl.py#L131 also seems to confirm that?

@casparvl

casparvl commented Aug 5, 2026

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Ah, my bad, I didn't modify that parameter, just added the -j in my interactive run.

Anyway, interactive run was succesful with the timeout increase. Let me see if I can actually rerun in parallel.

TEST_JOBS=16 PERL_TEST_HARNESS_ASAP=1 export LC_ALL=C && make -j 16 test_harness

I now indeed see a few more perl processes, I think. Not 16 for sure, but maybe 3-4, and really only one seems to be active at any given time... I'm guessing maybe the degree of parallelism in the test suite is limited. Also, our biggest bottleneck is unionfs, not CPU power... Oh well. Good to know at least if this also works :) #279 (comment) was succesful, so it seems so.

@casparvl

casparvl commented Aug 5, 2026

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Lets get some more datapoints on this:

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2
bot: build repo:eessi.io-2026.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic
bot: build repo:eessi.io-2026.06-software instance:eessi-bot-deucalion for:arch=aarch64/a64fx
bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv for:arch=riscv64/generic

@eessi-bot-aws

eessi-bot-aws Bot commented Aug 5, 2026

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New job on instance eessi-bot-mc-aws for repository eessi.io-2026.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_279/183661

date job status comment
Aug 05 14:39:37 UTC 2026 submitted job id 183661 awaits release by job manager
Aug 05 14:39:54 UTC 2026 released job awaits launch by Slurm scheduler
Aug 05 14:40:57 UTC 2026 running job 183661 is running
Aug 05 14:54:35 UTC 2026 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-183661.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-x86_64-amd-zen2-17859416240.tar.zstsize: 20 MiB (21664585 bytes)
entries: 3261
modules under 2026.06/software/linux/x86_64/amd/zen2/modules/all
Perl/5.42.0-GCCcore-15.2.0.lua
software under 2026.06/software/linux/x86_64/amd/zen2/software
Perl/5.42.0-GCCcore-15.2.0
reprod directories under 2026.06/software/linux/x86_64/amd/zen2/reprod
Perl/5.42.0-GCCcore-15.2.0/20260805_145336UTC
other under 2026.06/software/linux/x86_64/amd/zen2
no other files in tarball
Aug 05 14:54:35 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-183661.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@eessi-bot-deucalion

eessi-bot-deucalion Bot commented Aug 5, 2026

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New job on instance eessi-bot-deucalion for repository eessi.io-2026.06-software
Building on: a64fx
Building for: aarch64/a64fx
Job dir: /home/eessibot/new-bot/jobs/2026.08/pr_279/1805991

date job status comment
Aug 05 14:39:40 UTC 2026 submitted job id 1805991 awaits release by job manager
Aug 05 14:40:15 UTC 2026 released job awaits launch by Slurm scheduler
Aug 05 14:41:19 UTC 2026 running job 1805991 is running
Aug 05 15:09:14 UTC 2026 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-1805991.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-aarch64-a64fx-17859424890.tar.zstsize: 21 MiB (22231241 bytes)
entries: 3261
modules under 2026.06/software/linux/aarch64/a64fx/modules/all
Perl/5.42.0-GCCcore-15.2.0.lua
software under 2026.06/software/linux/aarch64/a64fx/software
Perl/5.42.0-GCCcore-15.2.0
reprod directories under 2026.06/software/linux/aarch64/a64fx/reprod
Perl/5.42.0-GCCcore-15.2.0/20260805_150755UTC
other under 2026.06/software/linux/aarch64/a64fx
no other files in tarball
Aug 05 15:09:14 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-1805991.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@eessi-bot-aws

eessi-bot-aws Bot commented Aug 5, 2026

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New job on instance eessi-bot-mc-aws for repository eessi.io-2026.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_279/183662

date job status comment
Aug 05 14:39:42 UTC 2026 submitted job id 183662 awaits release by job manager
Aug 05 14:39:50 UTC 2026 released job awaits launch by Slurm scheduler
Aug 05 14:46:07 UTC 2026 running job 183662 is running
Aug 05 14:57:41 UTC 2026 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-183662.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-aarch64-generic-17859417860.tar.zstsize: 20 MiB (21464336 bytes)
entries: 3261
modules under 2026.06/software/linux/aarch64/generic/modules/all
Perl/5.42.0-GCCcore-15.2.0.lua
software under 2026.06/software/linux/aarch64/generic/software
Perl/5.42.0-GCCcore-15.2.0
reprod directories under 2026.06/software/linux/aarch64/generic/reprod
Perl/5.42.0-GCCcore-15.2.0/20260805_145619UTC
other under 2026.06/software/linux/aarch64/generic
no other files in tarball
Aug 05 14:57:41 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-183662.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@riscv-eessi-io-bot

riscv-eessi-io-bot Bot commented Aug 5, 2026

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New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.08/pr_279/319761

date job status comment
Aug 05 14:39:44 UTC 2026 submitted job id 319761 awaits release by job manager
Aug 05 14:40:21 UTC 2026 released job awaits launch by Slurm scheduler
Aug 05 14:41:26 UTC 2026 running job 319761 is running
Aug 05 15:44:09 UTC 2026 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-319761.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.* created!
Artefacts
eessi-2026.06-software-linux-riscv64-generic-17859443980.tar.zstsize: 21 MiB (22870681 bytes)
entries: 3261
modules under 2026.06/software/linux/riscv64/generic/modules/all
Perl/5.42.0-GCCcore-15.2.0.lua
software under 2026.06/software/linux/riscv64/generic/software
Perl/5.42.0-GCCcore-15.2.0
reprod directories under 2026.06/software/linux/riscv64/generic/reprod
Perl/5.42.0-GCCcore-15.2.0/20260805_153838UTC
other under 2026.06/software/linux/riscv64/generic
no other files in tarball
Aug 05 15:44:09 UTC 2026 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-319761.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@boegel

boegel commented Aug 5, 2026

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@casparvl name of hook + PR title need a fix before we deploy this 🙊

@casparvl

casparvl commented Aug 5, 2026

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What do you mean? I just like confusing the hell out of people :D

@casparvl casparvl changed the title Reduce parallelism for Perl v5.42.0 tests Increase test timeout for Perl v5.42.0 tests Aug 5, 2026
@boegel

boegel commented Aug 5, 2026

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3/4 success, just waiting for riscv64/generic, so seems like we found a fix!

@casparvl Can you remove the test easystack file as well, and trigger a rebuild (once for every EESSI version)?

@boegel

boegel commented Aug 5, 2026

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That makes me realize: we'll have to be careful with deploying this, since the tarballs for the successful test builds will also be picked up... :-/

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3 participants